Intro to NGS Data Analysis

DNA

2022 dates:
October 10 – 9:30 am – 4:30 pmin person
June 15 – 9 am – 4 pmin person
February 28 – 9am – 4pm – online

Prerequisite: Linux Essentials (or proof/assertion of proficiency in bash shell)

REGISTER from calendar on Workshop page.

– It is necessary to register for each workshop separately.

This workshop is aimed at researchers interested in using open source tools for analyzing Next Generation DNA Sequencing (NGS) data. After learning essential techniques of the Linux operating system with the bash shell in the Linux Basics workshop, students will apply these newly acquired skills and identify single nucleotide polymorphisms (SNPs) from NGS data using Linux command-line driven open source software and explore the results using graphical visualization tools.

The computer laboratory exercises require that students bring a laptop* to connect to the Linux system in the Biotechnology Center. ;

A $140 fee  is required for each student.

* There is a minimal set of software that should be installed on laptops BEFORE attending the workshop. Instructions will be provided to attendees prior to the workshop and can be found within the PDF document: Preparation for Linux-based workshop

Instructors:
Jean-Yves Sgro,  Ph.D., Biotechnology Center – jsgro@wisc.edu

Previous instructor(s):
Dr. Deborah Muganda-Rippchen, Ph.D. Center for Predictive Computational Phenotyping
Dr. Jeremy Glasner, Ph.D.,  Biotechnology Center

*No-show Policy*
All cancellations need to be notified 72 hours in advance.